junipertcy/bipartiteSBM

Quick start

  • Why should I use bipartiteSBM?
  • Installation
  • Example Kernighan-Lin inference
  • Example MCMC inference
  • More MCMC inference
  • Explore the consistency of results
  • Generate synthetic networks
  • Make plots
  • Run codes in parallel
  • How to interpret entropy?

Dataset

  • Graph input format
  • Node type ordering
  • Southern women network
  • Malaria gene-substring network
  • Ancient metabolic network

Module documentation

  • biSBM package
  • engines package

Frequently Asked Questions (FAQ)

  • Local minima
  • Choosing parameters
  • Detectability limit

Additional resources

  • Useful slides
junipertcy/bipartiteSBM
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